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This function creates a rank plot of decoy scores based on various LP (coLogarithm of Probability) metrics, including LPM, LPS, LPF, and LPG scores (LPGM, LPGS, LPGF). The plot displays the ranked scores of decoys with a reference line for comparison.

Usage

plot_rank(data)

Arguments

data

A data frame containing identification data, including columns for decoy status (isDecoy) and any of the different LP metrics (LPM, LPS, LPF, LPGM, LPGS, LPGF).

Value

A ggplot object showing the rank plot of decoy scores for the different metrics. Each score type is displayed in a separate facet with the rank plotted on the x-axis and the score on the y-axis. The red diagonal line represents a reference for ideal ranking.